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Showing posts with label metabolism. Show all posts
Showing posts with label metabolism. Show all posts

Monday, 7 August 2017

Protein-rich diet may help soothe inflamed gut

Immune cells patrol the gut to ensure that harmful microbes hidden in the food we eat don't sneak into the body. Cells that are capable of triggering inflammation are balanced by cells that promote tolerance, protecting the body without damaging sensitive tissues. When the balance tilts too far toward inflammation, inflammatory bowel disease can result.

Now, researchers at Washington University School of Medicine in St. Louis have found that a kind of tolerance-promoting immune cell appears in mice that carry a specific bacterium in their guts. Further, the bacterium needs tryptophan - one of the building blocks of proteins - to trigger the cells' appearance.

"We established a link between one bacterial species - Lactobacillus reuteri - that is a normal part of the gut microbiome, and the development of a population of cells that promote tolerance," said Marco Colonna, MD, the Robert Rock Belliveau MD Professor of Pathology and the study's senior author. "The more tryptophan the mice had in their diet, the more of these immune cells they had."

If such findings hold true for people, it would suggest that the combination of L. reuteri and a tryptophan-rich diet may foster a more tolerant, less inflammatory gut environment, which could mean relief for the million or more Americans living with the abdominal pain and diarrhea of inflammatory bowel disease.

A representation of the 3D structure of the protein myoglobin showing turquoise α-helices. By AzaToth (self made based on PDB entry) [Public domain], via Wikimedia Commons
Postdoctoral researcher Luisa Cervantes-Barragan, PhD, was studying a kind of immune cell that promotes tolerance when she discovered that one group of study mice had such cells, while a second group of study mice that were the same strain of mice but were housed far apart from the first group did not have such cells.

The mice were genetically identical but had been born and raised separately, indicating that an environmental factor influenced whether the immune cells developed.

She suspected the difference had to do with the mice's gut microbiomes - the community of bacteria, viruses and fungi that normally live within the gastrointestinal tract.

Cervantes-Barragan collaborated with Chyi-Song Hsieh, MD, PhD, the Alan A. and Edith L. Wolff Distinguished Professor of Medicine, to sequence DNA from the intestines of the two groups of mice. They found six bacterial species present in the mice with the immune cells but absent from the mice without them.

With the help of Jeffrey I. Gordon, MD, the Dr. Robert J. Glaser Distinguished University Professor, the researchers turned to mice that had lived under sterile conditions since birth to identify which of the six species was involved in inducing the immune cells. Such mice lack a gut microbiome and do not develop this kind of immune cell. When L. reuteri was introduced to the germ-free mice, the immune cells arose.

To understand how the bacteria affected the immune system, the researchers grew L. reuteri in liquid and then transferred small amounts of the liquid - without bacteria - to immature immune cells isolated from mice. The immune cells developed into the tolerance-promoting cells. When the active component was purified from the liquid, it turned out to be a byproduct of tryptophan metabolism known as indole-3-lactic acid.

Tryptophan - commonly associated with turkey - is a normal part of the mouse and the human diet. Protein-rich foods contain appreciable amounts: nuts, eggs, seeds, beans, poultry, yogurt, cheese, even chocolate.

When the researchers doubled the amount of tryptophan in the mice's feed, the number of such cells rose by about 50 percent. When tryptophan levels were halved, the number of cells dropped by half.

People have the same tolerance-promoting cells as mice, and most of us shelter L. reuteri in our gastrointestinal tracts. It is not known whether tryptophan byproducts from L. reuteri induce the cells to develop in people as they do in mice, but defects in genes related to tryptophan have been found in people with inflammatory bowel disease.

"The development of these cells is probably something we want to encourage since these cells control inflammation on the inner surface of the intestines," Cervantes-Barragan said. "Potentially, high levels of tryptophan in the presence of L. reuteri may induce expansion of this population."

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Tuesday, 29 November 2016

How sand 'holds its breath'

Researchers in Australia have made an important discovery about how sand 'holds its breath' - specifically, how diatoms survive in the ever-changing environmental conditions of a beach. The finding has major implications for the biofuels industry.

Sand. By Siim Sepp (Own work), via Wikimedia Commons
The popular Middle Park beach in Melbourne is under the international spotlight following a world-first study by Monash University chemists who have discovered how sand 'holds its breath'.

The discovery, published in Nature Geoscience, has major implications and potential uses in the biofuels industry, according to lead authors Associate Professor Perran Cook and PhD student Michael Bourke from the Water Studies Centre, School of Chemistry.

Sand is full of algae called diatoms, but this environment is mixed about continuously so these organisms might get light one minute then be buried in the sediment with no oxygen the next.

"This is a new mechanism by which this type of algae survive under these conditions," said Associate Professor Cook.

"Our work has found that they ferment, like yeast ferments sugar to alcohol.
"In this case, the products are hydrogen and 'fats', for example, oleate, which is a component of olive oil."

Sand often has high concentrations of algae, which are highly productive and an important food source for food webs in the bay.

It is important to understand how these organisms survive in the harsh environment in which they live.

In this work, scientists present the first study of the importance of anoxic micro-algal metabolism through fermentation in permeable sediments.

They combined flow-through reactor experiments with microbiological approaches to determine the dominant contributors and pathways of dissolved inorganic carbon production in permeable sediments.

They show that micro-algal dark fermentation is the dominant metabolic pathway, which is the first time this has been documented in an environmental setting.

"The finding that hydrogen is a by-product of this metabolism has important implications for the types of bacteria present in the sediment," said Associate Professor Cook.

"It is well known that bacteria in the sediment can 'eat' hydrogen, however, these hydrogen eating bacteria may be more common than we previously thought."

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